IL_7QVP_493

3D structure

PDB id

7QVP (explore in PDB, NAKB, or RNA 3D Hub)

Description

Human collided disome (di-ribosome) stalled on XBP1 mRNA

Experimental method

ELECTRON MICROSCOPY

Resolution

3 Å

Loop

Sequence

GCG*CC

Length

5 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

7QVP|1|S3|G|1108
7QVP|1|S3|C|1109
7QVP|1|S3|G|1110
*
7QVP|1|S3|C|1123
7QVP|1|S3|C|1124

Current chains

Chain S3

18S ribosomal RNA

Nearby chains

Chain RA

40S ribosomal protein SA

Chain RB

40S ribosomal protein S3a

Chain RR

40S ribosomal protein S17

Chain Rb

40S ribosomal protein S27