IL_7QVP_501

3D structure

PDB id

7QVP (explore in PDB, NAKB, or RNA 3D Hub)

Description

Human collided disome (di-ribosome) stalled on XBP1 mRNA

Experimental method

ELECTRON MICROSCOPY

Resolution

3 Å

Loop

Sequence

GACAGGA*UUC

Length

10 nucleotides

Bulged bases

7QVP|1|S3|A|1284, 7QVP|1|S3|G|1285, 7QVP|1|S3|G|1286

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

7QVP|1|S3|G|1281
7QVP|1|S3|A|1282
7QVP|1|S3|C|1283
7QVP|1|S3|A|1284
7QVP|1|S3|G|1285
7QVP|1|S3|G|1286
7QVP|1|S3|A|1287
*
7QVP|1|S3|U|1314
7QVP|1|S3|U|1315
7QVP|1|S3|C|1316

Current chains

Chain S3

18S ribosomal RNA

Nearby chains

Chain RK

40S ribosomal protein S10

Chain Rf

40S ribosomal protein S12

Chain Rh

Ubiquitin-40S ribosomal protein S27a