IL_7QVP_508

3D structure

PDB id

7QVP (explore in PDB, NAKB, or RNA 3D Hub)

Description

Human collided disome (di-ribosome) stalled on XBP1 mRNA

Experimental method

ELECTRON MICROSCOPY

Resolution

3 Å

Loop

Sequence

UCU*AAUA

Length

7 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

7QVP|1|S3|U|1340
7QVP|1|S3|C|1341
7QVP|1|S3|U|1342
*
7QVP|1|S3|A|1483
7QVP|1|S3|A|1484
7QVP|1|S3|U|1485
7QVP|1|S3|A|1486

Current chains

Chain S3

18S ribosomal RNA

Nearby chains

Chain RC

40S ribosomal protein S2

Chain RD

40S ribosomal protein S3

Chain RQ

40S ribosomal protein S16

Chain RU

40S ribosomal protein S20

Chain Rd

40S ribosomal protein S29