IL_7QVP_541

3D structure

PDB id

7QVP (explore in PDB, NAKB, or RNA 3D Hub)

Description

Human collided disome (di-ribosome) stalled on XBP1 mRNA

Experimental method

ELECTRON MICROSCOPY

Resolution

3 Å

Loop

Sequence

GUGUCGGCGG*CCCCGACC

Length

18 nucleotides

Bulged bases

None detected

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

7QVP|1|L5|G|491
7QVP|1|L5|U|492
7QVP|1|L5|G|493
7QVP|1|L5|U|494
7QVP|1|L5|C|495
7QVP|1|L5|G|496
7QVP|1|L5|G|497
7QVP|1|L5|C|498
7QVP|1|L5|G|499
7QVP|1|L5|G|500
*
7QVP|1|L5|C|655
7QVP|1|L5|C|656
7QVP|1|L5|C|657
7QVP|1|L5|C|658
7QVP|1|L5|G|659
7QVP|1|L5|A|660
7QVP|1|L5|C|661
7QVP|1|L5|C|662

Current chains

Chain L5

28S ribosomal RNA

Nearby chains

Chain LC

60S ribosomal protein L4

Chain LQ

60S ribosomal protein L18