IL_7QVP_548
3D structure
- PDB id
- 7QVP (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Human collided disome (di-ribosome) stalled on XBP1 mRNA
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3 Å
Loop
- Sequence
- GGGGGCGAGCCCCGAGGGGCUCUCGCUUCUGGCGCCAAG*CGAC
- Length
- 43 nucleotides
- Bulged bases
- 7QVP|1|L5|G|4104, 7QVP|1|L5|G|4115, 7QVP|1|L5|C|4116, 7QVP|1|L5|U|4117, 7QVP|1|L5|U|4118, 7QVP|1|L5|G|4121
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
7QVP|1|L5|G|4091
7QVP|1|L5|G|4092
7QVP|1|L5|G|4093
7QVP|1|L5|G|4094
7QVP|1|L5|G|4095
7QVP|1|L5|C|4096
7QVP|1|L5|G|4097
7QVP|1|L5|A|4098
7QVP|1|L5|G|4099
7QVP|1|L5|C|4100
7QVP|1|L5|C|4101
7QVP|1|L5|C|4102
7QVP|1|L5|C|4103
7QVP|1|L5|G|4104
7QVP|1|L5|A|4105
7QVP|1|L5|G|4106
7QVP|1|L5|G|4107
7QVP|1|L5|G|4108
7QVP|1|L5|G|4109
7QVP|1|L5|C|4110
7QVP|1|L5|U|4111
7QVP|1|L5|C|4112
7QVP|1|L5|U|4113
7QVP|1|L5|C|4114
7QVP|1|L5|G|4115
7QVP|1|L5|C|4116
7QVP|1|L5|U|4117
7QVP|1|L5|U|4118
7QVP|1|L5|C|4119
7QVP|1|L5|U|4120
7QVP|1|L5|G|4121
7QVP|1|L5|G|4122
7QVP|1|L5|C|4123
7QVP|1|L5|G|4124
7QVP|1|L5|C|4125
7QVP|1|L5|C|4126
7QVP|1|L5|A|4127
7QVP|1|L5|A|4128
7QVP|1|L5|G|4129
*
7QVP|1|L5|C|4155
7QVP|1|L5|G|4156
7QVP|1|L5|A|4157
7QVP|1|L5|C|4158
Current chains
- Chain L5
- 28S ribosomal RNA
Nearby chains
- Chain LA
- 60S ribosomal protein L8
- Chain LG
- 60S ribosomal protein L7a
- Chain LX
- 60S ribosomal protein L23a
- Chain LZ
- 60S ribosomal protein L27
- Chain Lc
- 60S ribosomal protein L30
- Chain Lg
- 60S ribosomal protein L34
- Chain Lp
- 60S ribosomal protein L37a
- Chain RE
- 40S ribosomal protein S4, X isoform
- Chain S3
- Small subunit ribosomal RNA; SSU rRNA
Coloring options: