IL_7QVP_568
3D structure
- PDB id
- 7QVP (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Human collided disome (di-ribosome) stalled on XBP1 mRNA
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3 Å
Loop
- Sequence
- GCUCAGCGUG*CCGUUGAACCC
- Length
- 21 nucleotides
- Bulged bases
- 7QVP|1|S3|U|1585, 7QVP|1|S3|G|1587
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
7QVP|1|S3|G|1541
7QVP|1|S3|C|1542
7QVP|1|S3|U|1543
7QVP|1|S3|C|1544
7QVP|1|S3|A|1545
7QVP|1|S3|G|1546
7QVP|1|S3|C|1547
7QVP|1|S3|G|1548
7QVP|1|S3|U|1549
7QVP|1|S3|G|1550
*
7QVP|1|S3|C|1582
7QVP|1|S3|C|1583
7QVP|1|S3|G|1584
7QVP|1|S3|U|1585
7QVP|1|S3|U|1586
7QVP|1|S3|G|1587
7QVP|1|S3|A|1588
7QVP|1|S3|A|1589
7QVP|1|S3|C|1590
7QVP|1|S3|C|1591
7QVP|1|S3|C|1592
Current chains
- Chain S3
- 18S ribosomal RNA
Nearby chains
- Chain RD
- 40S ribosomal protein S3
- Chain RF
- 40S ribosomal protein S5
- Chain RQ
- 40S ribosomal protein S16
- Chain RT
- 40S ribosomal protein S19
- Chain RU
- 40S ribosomal protein S20
- Chain RZ
- 40S ribosomal protein S25
- Chain Rd
- 40S ribosomal protein S29
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