IL_7QVP_571

3D structure

PDB id

7QVP (explore in PDB, NAKB, or RNA 3D Hub)

Description

Human collided disome (di-ribosome) stalled on XBP1 mRNA

Experimental method

ELECTRON MICROSCOPY

Resolution

3 Å

Loop

Sequence

GAUUCAAC*GCGCAUUUC

Length

17 nucleotides

Bulged bases

7QVP|1|L6|U|467, 7QVP|1|L6|C|685, 7QVP|1|L6|U|687

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

7QVP|1|L6|G|465
7QVP|1|L6|A|466
7QVP|1|L6|U|467
7QVP|1|L6|U|468
7QVP|1|L6|C|469
7QVP|1|L6|A|470
7QVP|1|L6|A|471
7QVP|1|L6|C|472
*
7QVP|1|L6|G|682
7QVP|1|L6|C|683
7QVP|1|L6|G|684
7QVP|1|L6|C|685
7QVP|1|L6|A|686
7QVP|1|L6|U|687
7QVP|1|L6|U|688
7QVP|1|L6|U|689
7QVP|1|L6|C|690

Current chains

Chain L6

28S ribosomal RNA

Nearby chains

Chain ME

60S ribosomal protein L6

Chain Mr

60S ribosomal protein L28