IL_7QWQ_007

3D structure

PDB id

7QWQ (explore in PDB, NAKB, or RNA 3D Hub)

Description

Ternary complex of ribosome nascent chain with SRP and NAC

Experimental method

ELECTRON MICROSCOPY

Resolution

2.83 Å

Loop

Sequence

GUUC*GAUC

Length

8 nucleotides

Bulged bases

None detected

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_7QWQ_007 not in the Motif Atlas

Geometric match to IL_4WF9_109

Geometric discrepancy: 0.3306

The information below is about IL_4WF9_109

Detailed Annotation

Tandem non-canonical cWW pairs

Broad Annotation

No text annotation

Motif group

IL_30621.4

Basepair signature

cWW-cWW-cWW-cWW

Number of instances in this motif group

66

Unit IDs

7QWQ|1|1|G|120
7QWQ|1|1|U|121
7QWQ|1|1|U|122
7QWQ|1|1|C|123
*
7QWQ|1|1|G|227
7QWQ|1|1|A|228
7QWQ|1|1|U|229
7QWQ|1|1|C|230

Current chains

Chain 1

SRP RNA 7SL

Nearby chains

Chain v

Signal recognition particle subunit SRP68