IL_7QWQ_056

3D structure

PDB id

7QWQ (explore in PDB, NAKB, or RNA 3D Hub)

Description

Ternary complex of ribosome nascent chain with SRP and NAC

Experimental method

ELECTRON MICROSCOPY

Resolution

2.83 Å

Loop

Sequence

CGAG*CGAG

Length

8 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_7QWQ_056 not in the Motif Atlas

Geometric match to IL_4WF9_087

Geometric discrepancy: 0.1863

The information below is about IL_4WF9_087

Detailed Annotation

Double sheared

Broad Annotation

Double sheared

Motif group

IL_58355.3

Basepair signature

cWW-tSH-tHS-cWW

Number of instances in this motif group

47

Unit IDs

7QWQ|1|5|C|1431
7QWQ|1|5|G|1432
7QWQ|1|5|A|1433
7QWQ|1|5|G|1434
*
7QWQ|1|5|C|1450
7QWQ|1|5|G|1451
7QWQ|1|5|A|1452
7QWQ|1|5|G|1453

Current chains

Chain 5

28S rRNA

Nearby chains

Chain Q

eL18