IL_7QWQ_099

3D structure

PDB id

7QWQ (explore in PDB, NAKB, or RNA 3D Hub)

Description

Ternary complex of ribosome nascent chain with SRP and NAC

Experimental method

ELECTRON MICROSCOPY

Resolution

2.83 Å

Loop

Sequence

CGC*GG

Length

5 nucleotides

Bulged bases

7QWQ|1|5|G|2652

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_7QWQ_099 not in the Motif Atlas

Geometric match to IL_2IZN_001

Geometric discrepancy: 0.32

The information below is about IL_2IZN_001

Detailed Annotation

Single bulged G

Broad Annotation

No text annotation

Motif group

IL_28408.3

Basepair signature

cWW-L-cWW

Number of instances in this motif group

76

Unit IDs

7QWQ|1|5|C|2651
7QWQ|1|5|G|2652
7QWQ|1|5|C|2653
*
7QWQ|1|5|G|2681
7QWQ|1|5|G|2682

Current chains

Chain 5

28S rRNA

Nearby chains

Chain g

60S ribosomal protein L34

Chain p

eL43