3D structure

PDB id
7QWQ (explore in PDB, NAKB, or RNA 3D Hub)
Description
Ternary complex of ribosome nascent chain with SRP and NAC
Experimental method
ELECTRON MICROSCOPY
Resolution
2.83 Å

Loop

Sequence
GCCUCGGAUAGC*GUGCGGAGUGC
Length
23 nucleotides
Bulged bases
7QWQ|1|5|C|4756, 7QWQ|1|5|C|4757, 7QWQ|1|5|U|4763, 7QWQ|1|5|C|4871, 7QWQ|1|5|G|4872, 7QWQ|1|5|A|4874, 7QWQ|1|5|G|4877
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
Not in a motif group
Basepair signature
Not available
Number of instances in this motif group
0

Unit IDs

7QWQ|1|5|G|4755
7QWQ|1|5|C|4756
7QWQ|1|5|C|4757
7QWQ|1|5|U|4758
7QWQ|1|5|C|4759
7QWQ|1|5|G|4760
7QWQ|1|5|G|4761
7QWQ|1|5|A|4762
7QWQ|1|5|U|4763
7QWQ|1|5|A|4764
7QWQ|1|5|G|4765
7QWQ|1|5|C|4766
*
7QWQ|1|5|G|4868
7QWQ|1|5|U|4869
7QWQ|1|5|G|4870
7QWQ|1|5|C|4871
7QWQ|1|5|G|4872
7QWQ|1|5|G|4873
7QWQ|1|5|A|4874
7QWQ|1|5|G|4875
7QWQ|1|5|U|4876
7QWQ|1|5|G|4877
7QWQ|1|5|C|4878

Current chains

Chain 5
28S rRNA

Nearby chains

Chain E
60S ribosomal protein L6
Chain H
60S ribosomal protein L9
Chain M
60S ribosomal protein L14
Chain O
60S ribosomal protein L13a
Chain S
60S ribosomal protein L18a

Coloring options:

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