IL_7QWQ_180

3D structure

PDB id

7QWQ (explore in PDB, NAKB, or RNA 3D Hub)

Description

Ternary complex of ribosome nascent chain with SRP and NAC

Experimental method

ELECTRON MICROSCOPY

Resolution

2.83 Å

Loop

Sequence

AGU*AAU

Length

6 nucleotides

Bulged bases

7QWQ|1|5|G|1724

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_7QWQ_180 not in the Motif Atlas

Geometric match to IL_7KGA_003

Geometric discrepancy: 0.3376

The information below is about IL_7KGA_003

Detailed Annotation

Single stack bend

Broad Annotation

No text annotation

Motif group

IL_15011.4

Basepair signature

cWW-L-cWW

Number of instances in this motif group

61

Unit IDs

7QWQ|1|5|A|1723
7QWQ|1|5|G|1724
7QWQ|1|5|U|1725
*
7QWQ|1|5|A|1837
7QWQ|1|5|A|1838
7QWQ|1|5|U|1839

Current chains

Chain 5

28S rRNA

Nearby chains

Chain F

uL30

Chain T

60S ribosomal protein L21

Chain b

60S ribosomal protein L29