IL_7QWQ_189

3D structure

PDB id

7QWQ (explore in PDB, NAKB, or RNA 3D Hub)

Description

Ternary complex of ribosome nascent chain with SRP and NAC

Experimental method

ELECTRON MICROSCOPY

Resolution

2.83 Å

Loop

Sequence

GUG*UUUUU

Length

8 nucleotides

Bulged bases

7QWQ|1|5|U|4437

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_7QWQ_189 not in the Motif Atlas

Homologous match to IL_8CRE_113

Geometric discrepancy: 0.2031

The information below is about IL_8CRE_113

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_51387.3

Basepair signature

cWW-cSH-cWW-cWW

Number of instances in this motif group

21

Unit IDs

7QWQ|1|5|G|4405
7QWQ|1|5|U|4406
7QWQ|1|5|G|4407
*
7QWQ|1|5|U|4435
7QWQ|1|5|U|4436
7QWQ|1|5|U|4437
7QWQ|1|5|U|4438
7QWQ|1|5|U|4439

Current chains

Chain 5

28S rRNA

Nearby chains

Chain B

uL3

Chain I

60S ribosomal protein L10