IL_7QWR_014

3D structure

PDB id

7QWR (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the ribosome-nascent chain containing an ER signal sequence in complex with NAC

Experimental method

ELECTRON MICROSCOPY

Resolution

2.9 Å

Loop

Sequence

GUC*GC

Length

5 nucleotides

Bulged bases

7QWR|1|5|U|200

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_7QWR_014 not in the Motif Atlas

Homologous match to IL_5TBW_012

Geometric discrepancy: 0.3152

The information below is about IL_5TBW_012

Detailed Annotation

Single bulged U

Broad Annotation

No text annotation

Motif group

IL_83039.19

Basepair signature

cWW-L-cWW

Number of instances in this motif group

123

Unit IDs

7QWR|1|5|G|199
7QWR|1|5|U|200
7QWR|1|5|C|201
*
7QWR|1|5|G|214
7QWR|1|5|C|215

Current chains

Chain 5

28S rRNA

Nearby chains

Chain Y

Ribosomal protein L26