IL_7QWR_063

3D structure

PDB id

7QWR (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the ribosome-nascent chain containing an ER signal sequence in complex with NAC

Experimental method

ELECTRON MICROSCOPY

Resolution

2.9 Å

Loop

Sequence

GUCU*AAC

Length

7 nucleotides

Bulged bases

7QWR|1|5|U|1754, 7QWR|1|5|C|1755

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_7QWR_063 not in the Motif Atlas

Geometric match to IL_5VCI_005

Geometric discrepancy: 0.3472

The information below is about IL_5VCI_005

Detailed Annotation

Not an internal loop

Broad Annotation

Not an internal loop

Motif group

IL_64417.2

Basepair signature

cWW-L-cWW

Number of instances in this motif group

18

Unit IDs

7QWR|1|5|G|1753
7QWR|1|5|U|1754
7QWR|1|5|C|1755
7QWR|1|5|U|1756
*
7QWR|1|5|A|1775
7QWR|1|5|A|1776
7QWR|1|5|C|1777

Current chains

Chain 5

28S rRNA

Nearby chains

Chain D

Ribosomal_L18_c domain-containing protein