IL_7QWR_095

3D structure

PDB id

7QWR (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the ribosome-nascent chain containing an ER signal sequence in complex with NAC

Experimental method

ELECTRON MICROSCOPY

Resolution

2.9 Å

Loop

Sequence

CGUAAC*GGAUAAG

Length

13 nucleotides

Bulged bases

7QWR|1|5|U|2880

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_7QWR_095 not in the Motif Atlas

Geometric match to IL_5TBW_078

Geometric discrepancy: 0.1177

The information below is about IL_5TBW_078

Detailed Annotation

tSH-tSH-tHH-tHS

Broad Annotation

No text annotation

Motif group

IL_65969.4

Basepair signature

cWW-tSH-L-R-tHH-tHS-cWW

Number of instances in this motif group

7

Unit IDs

7QWR|1|5|C|2867
7QWR|1|5|G|2868
7QWR|1|5|U|2869
7QWR|1|5|A|2870
7QWR|1|5|A|2871
7QWR|1|5|C|2872
*
7QWR|1|5|G|2877
7QWR|1|5|G|2878
7QWR|1|5|A|2879
7QWR|1|5|U|2880
7QWR|1|5|A|2881
7QWR|1|5|A|2882
7QWR|1|5|G|2883

Current chains

Chain 5

28S rRNA

Nearby chains

Chain n

60s ribosomal protein l41

Chain p

eL43