IL_7QWR_105

3D structure

PDB id

7QWR (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the ribosome-nascent chain containing an ER signal sequence in complex with NAC

Experimental method

ELECTRON MICROSCOPY

Resolution

2.9 Å

Loop

Sequence

GAAUG*CGC

Length

8 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_7QWR_105 not in the Motif Atlas

Geometric match to IL_8C3A_092

Geometric discrepancy: 0.2573

The information below is about IL_8C3A_092

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_58579.1

Basepair signature

cWW-L-R-L-cWW

Number of instances in this motif group

6

Unit IDs

7QWR|1|5|G|3710
7QWR|1|5|A|3711
7QWR|1|5|A|3712
7QWR|1|5|U|3713
7QWR|1|5|G|3714
*
7QWR|1|5|C|3739
7QWR|1|5|G|3740
7QWR|1|5|C|3741

Current chains

Chain 5

28S rRNA

Nearby chains

Chain A

60S ribosomal protein L8