IL_7QWR_116

3D structure

PDB id

7QWR (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the ribosome-nascent chain containing an ER signal sequence in complex with NAC

Experimental method

ELECTRON MICROSCOPY

Resolution

2.9 Å

Loop

Sequence

GA*UAC

Length

5 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_7QWR_116 not in the Motif Atlas

Geometric match to IL_4WF9_098

Geometric discrepancy: 0.2956

The information below is about IL_4WF9_098

Detailed Annotation

Single bulged A

Broad Annotation

Single bulged A

Motif group

IL_14190.2

Basepair signature

cWW-L-cWW

Number of instances in this motif group

160

Unit IDs

7QWR|1|5|G|4191
7QWR|1|5|A|4192
*
7QWR|1|5|U|4202
7QWR|1|5|A|4203
7QWR|1|5|C|4204

Current chains

Chain 5

28S rRNA

Nearby chains

Chain I

60S ribosomal protein L10

Chain T

60S ribosomal protein L21

Chain b

60S ribosomal protein L29

Chain o

eL42