3D structure

PDB id
7QWR (explore in PDB, NAKB, or RNA 3D Hub)
Description
Structure of the ribosome-nascent chain containing an ER signal sequence in complex with NAC
Experimental method
ELECTRON MICROSCOPY
Resolution
2.9 Å

Loop

Sequence
GCCUCGGAUAGC*GUGCGGAGUGC
Length
23 nucleotides
Bulged bases
7QWR|1|5|C|4756, 7QWR|1|5|C|4757, 7QWR|1|5|U|4763, 7QWR|1|5|C|4871, 7QWR|1|5|G|4872, 7QWR|1|5|A|4874, 7QWR|1|5|G|4877
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
Not in a motif group
Basepair signature
Not available
Number of instances in this motif group
0

Unit IDs

7QWR|1|5|G|4755
7QWR|1|5|C|4756
7QWR|1|5|C|4757
7QWR|1|5|U|4758
7QWR|1|5|C|4759
7QWR|1|5|G|4760
7QWR|1|5|G|4761
7QWR|1|5|A|4762
7QWR|1|5|U|4763
7QWR|1|5|A|4764
7QWR|1|5|G|4765
7QWR|1|5|C|4766
*
7QWR|1|5|G|4868
7QWR|1|5|U|4869
7QWR|1|5|G|4870
7QWR|1|5|C|4871
7QWR|1|5|G|4872
7QWR|1|5|G|4873
7QWR|1|5|A|4874
7QWR|1|5|G|4875
7QWR|1|5|U|4876
7QWR|1|5|G|4877
7QWR|1|5|C|4878

Current chains

Chain 5
28S rRNA

Nearby chains

Chain E
60S ribosomal protein L6
Chain H
60S ribosomal protein L9
Chain M
60S ribosomal protein L14
Chain O
60S ribosomal protein L13a
Chain S
60S ribosomal protein L18a

Coloring options:

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