3D structure

PDB id
7QWR (explore in PDB, NAKB, or RNA 3D Hub)
Description
Structure of the ribosome-nascent chain containing an ER signal sequence in complex with NAC
Experimental method
ELECTRON MICROSCOPY
Resolution
2.9 Å

Loop

Sequence
GCUGGGAAGG*CAGCAGCACUCGC
Length
23 nucleotides
Bulged bases
7QWR|1|5|U|728, 7QWR|1|5|G|729, 7QWR|1|5|A|929, 7QWR|1|5|G|930, 7QWR|1|5|C|934, 7QWR|1|5|A|935, 7QWR|1|5|C|936, 7QWR|1|5|U|937
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
Not in a motif group
Basepair signature
Not available
Number of instances in this motif group
0

Unit IDs

7QWR|1|5|G|726
7QWR|1|5|C|727
7QWR|1|5|U|728
7QWR|1|5|G|729
7QWR|1|5|G|730
7QWR|1|5|G|731
7QWR|1|5|A|732
7QWR|1|5|A|733
7QWR|1|5|G|734
7QWR|1|5|G|735
*
7QWR|1|5|C|928
7QWR|1|5|A|929
7QWR|1|5|G|930
7QWR|1|5|C|931
7QWR|1|5|A|932
7QWR|1|5|G|933
7QWR|1|5|C|934
7QWR|1|5|A|935
7QWR|1|5|C|936
7QWR|1|5|U|937
7QWR|1|5|C|938
7QWR|1|5|G|939
7QWR|1|5|C|940

Current chains

Chain 5
28S rRNA

Nearby chains

Chain C
60S ribosomal protein L4
Chain F
uL30
Chain M
60S ribosomal protein L14
Chain S
60S ribosomal protein L18a

Coloring options:

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