IL_7QWR_172

3D structure

PDB id

7QWR (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the ribosome-nascent chain containing an ER signal sequence in complex with NAC

Experimental method

ELECTRON MICROSCOPY

Resolution

2.9 Å

Loop

Sequence

GGG*CC

Length

5 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_7QWR_172 not in the Motif Atlas

Geometric match to IL_7A0S_054

Geometric discrepancy: 0.1966

The information below is about IL_7A0S_054

Detailed Annotation

Single stack bend

Broad Annotation

No text annotation

Motif group

IL_15011.1

Basepair signature

cWW-L-cWW

Number of instances in this motif group

48

Unit IDs

7QWR|1|5|G|4090
7QWR|1|5|G|4091
7QWR|1|5|G|4092
*
7QWR|1|5|C|4158
7QWR|1|5|C|4159

Current chains

Chain 5

28S rRNA

Nearby chains

Chain G

60S ribosomal protein L7a

Chain X

Ribosomal_L23eN domain-containing protein