IL_7QWR_176

3D structure

PDB id

7QWR (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the ribosome-nascent chain containing an ER signal sequence in complex with NAC

Experimental method

ELECTRON MICROSCOPY

Resolution

2.9 Å

Loop

Sequence

GUCC*GUC

Length

7 nucleotides

Bulged bases

7QWR|1|5|C|4771

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_7QWR_176 not in the Motif Atlas

Geometric match to IL_2O3X_003

Geometric discrepancy: 0.2207

The information below is about IL_2O3X_003

Detailed Annotation

Decoding loop related

Broad Annotation

Decoding loop related

Motif group

IL_53541.1

Basepair signature

cWW-L-cWW

Number of instances in this motif group

12

Unit IDs

7QWR|1|5|G|4769
7QWR|1|5|U|4770
7QWR|1|5|C|4771
7QWR|1|5|C|4772
*
7QWR|1|5|G|4863
7QWR|1|5|U|4864
7QWR|1|5|C|4865

Current chains

Chain 5

28S rRNA

Nearby chains

Chain H

60S ribosomal protein L9

Chain O

60S ribosomal protein L13a