IL_7QWS_045

3D structure

PDB id

7QWS (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of ribosome translating beta-tubulin in complex with TTC5 and NAC

Experimental method

ELECTRON MICROSCOPY

Resolution

3.4 Å

Loop

Sequence

CGAG*CGAG

Length

8 nucleotides

Bulged bases

None detected

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_7QWS_045 not in the Motif Atlas

Geometric match to IL_4XWF_001

Geometric discrepancy: 0.1588

The information below is about IL_4XWF_001

Detailed Annotation

Double sheared

Broad Annotation

Double sheared

Motif group

IL_58355.2

Basepair signature

cWW-tSH-tHS-cWW

Number of instances in this motif group

43

Unit IDs

7QWS|1|5|C|1431
7QWS|1|5|G|1432
7QWS|1|5|A|1433
7QWS|1|5|G|1434
*
7QWS|1|5|C|1450
7QWS|1|5|G|1451
7QWS|1|5|A|1452
7QWS|1|5|G|1453

Current chains

Chain 5

28S rRNA

Nearby chains

Chain Q

Ribosomal protein L18