IL_7QWS_116

3D structure

PDB id

7QWS (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of ribosome translating beta-tubulin in complex with TTC5 and NAC

Experimental method

ELECTRON MICROSCOPY

Resolution

3.4 Å

Loop

Sequence

GCG*CU

Length

5 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_7QWS_116 not in the Motif Atlas

Geometric match to IL_7RQB_058

Geometric discrepancy: 0.3423

The information below is about IL_7RQB_058

Detailed Annotation

Single stack bend

Broad Annotation

Single stack bend

Motif group

IL_76488.4

Basepair signature

cWW-L-cWW

Number of instances in this motif group

36

Unit IDs

7QWS|1|5|G|4095
7QWS|1|5|C|4096
7QWS|1|5|G|4097
*
7QWS|1|5|C|4112
7QWS|1|5|U|4113

Current chains

Chain 5

28S rRNA

Nearby chains

Chain A

60S ribosomal protein L8

Chain G

60S ribosomal protein L7a

Chain g

60S ribosomal protein L34