IL_7R4X_063
3D structure
- PDB id
- 7R4X (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Cryo-EM reconstruction of the human 40S ribosomal subunit - Full map
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.15 Å
Loop
- Sequence
- CC(PSU)G*CGCG
- Length
- 8 nucleotides
- Bulged bases
- None detected
- QA status
- Unknown status
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_7R4X_063 not in the Motif Atlas
- Geometric match to IL_3WBM_002
- Geometric discrepancy: 0.2825
- The information below is about IL_3WBM_002
- Detailed Annotation
- Tandem non-canonical cWW pairs
- Broad Annotation
- No text annotation
- Motif group
- IL_15225.2
- Basepair signature
- cWW-cWW-cWW-cWW
- Number of instances in this motif group
- 39
Unit IDs
7R4X|1|2|C|1230
7R4X|1|2|C|1231
7R4X|1|2|PSU|1232
7R4X|1|2|G|1233
*
7R4X|1|2|C|1525
7R4X|1|2|G|1526
7R4X|1|2|C|1527
7R4X|1|2|G|1528
Current chains
- Chain 2
- 18S ribosomal RNA
Nearby chains
- Chain P
- 40S ribosomal protein S15
- Chain Q
- 40S ribosomal protein S16
- Chain S
- 40S ribosomal protein S18
- Chain T
- 40S ribosomal protein S19
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