IL_7R4X_076
3D structure
- PDB id
- 7R4X (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Cryo-EM reconstruction of the human 40S ribosomal subunit - Full map
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.15 Å
Loop
- Sequence
- ACUA*U(OMU)CU
- Length
- 8 nucleotides
- Bulged bases
- 7R4X|1|2|C|1403, 7R4X|1|2|U|1404
- QA status
- Unknown status
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_7R4X_076 not in the Motif Atlas
- Geometric match to IL_4V88_456
- Geometric discrepancy: 0.1044
- The information below is about IL_4V88_456
- Detailed Annotation
- Minor groove platform
- Broad Annotation
- No text annotation
- Motif group
- IL_76458.1
- Basepair signature
- cWW-cSH-L-cWW
- Number of instances in this motif group
- 2
Unit IDs
7R4X|1|2|A|1402
7R4X|1|2|C|1403
7R4X|1|2|U|1404
7R4X|1|2|A|1405
*
7R4X|1|2|U|1441
7R4X|1|2|OMU|1442
7R4X|1|2|C|1443
7R4X|1|2|U|1444
Current chains
- Chain 2
- 18S ribosomal RNA
Nearby chains
- Chain D
- 40S ribosomal protein S3
- Chain Q
- 40S ribosomal protein S16
- Chain U
- 40S ribosomal protein S20
- Chain g
- Receptor of activated protein C kinase 1
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