Motif IL_76458.1 Version IL_76458.1 of this group appears in releases 3.80 to 3.90
| #S | Loop id | PDB | Disc | #Non-core | Annotation | Chain(s) | Standardized name | 1 | 2 | 3 | 4 | break | 5 | 6 | 1-3 | 1-6 | 4-5 | ||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1 | IL_8C3A_462 | 8C3A | 0.0000 | 2 | Minor groove platform (H) | CM | SSU rRNA | U | 1363 | U | 1364 | C | 1365 | U | 1366 | * | A | 1330 | A | 1333 | ncSH | cWW | cWW |
| 2 | IL_4V88_456 | 4V88 | 0.1282 | 2 | Minor groove platform | A6 | SSU rRNA | U | 1377 | U | 1378 | C | 1379 | U | 1380 | * | A | 1345 | A | 1348 | cSH | cWW | cWW |
3D structures
Complete motif including flanking bases
| Sequence | Counts |
|---|---|
| UUCU*AAUA | 2 |
Non-Watson-Crick part of the motif
| Sequence | Counts |
|---|---|
| UC*AU | 2 |
Release history
| Release | 3.80 | 3.81 | 3.82 | 3.83 | 3.84 | 3.85 | 3.86 | 3.87 | 3.88 | 3.89 | 3.90 |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Date | 2024-01-31 | 2024-02-28 | 2024-03-27 | 2024-04-24 | 2024-05-22 | 2024-06-19 | 2024-07-17 | 2024-08-14 | 2024-09-11 | 2024-10-09 | 2024-11-06 |
| Status | New id, 1 parent | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match |
Parent motifs
This motif has no parent motifs.
Children motifs
This motif has no children motifs.- Annotations
-
- Minor groove platform (1)
- Minor groove platform (H) (1)
- Basepair signature
- cWW-cSH-L-cWW
- Heat map statistics
- Min 0.13 | Avg 0.06 | Max 0.13
Coloring options: