IL_7R7A_073
3D structure
- PDB id
- 7R7A (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- State E1 nucleolar 60S ribosome biogenesis intermediate - Composite model
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.04 Å
Loop
- Sequence
- GGAG*CGCCAGUGAAAUAC
- Length
- 18 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_7R7A_073 not in the Motif Atlas
- Geometric match to IL_3U4M_003
- Geometric discrepancy: 0.2088
- The information below is about IL_3U4M_003
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_75283.2
- Basepair signature
- cWW-tSS-L-R-L-tHS-L-cWW-L-tWH-tWH-L-L-R
- Number of instances in this motif group
- 3
Unit IDs
7R7A|1|1|G|2466
7R7A|1|1|G|2467
7R7A|1|1|A|2468
7R7A|1|1|G|2469
*
7R7A|1|1|C|2476
7R7A|1|1|G|2477
7R7A|1|1|C|2478
7R7A|1|1|C|2479
7R7A|1|1|A|2480
7R7A|1|1|G|2481
7R7A|1|1|U|2482
7R7A|1|1|G|2483
7R7A|1|1|A|2484
7R7A|1|1|A|2485
7R7A|1|1|A|2486
7R7A|1|1|U|2487
7R7A|1|1|A|2488
7R7A|1|1|C|2489
Current chains
- Chain 1
- 25S rRNA
Nearby chains
- Chain a
- Ribosomal protein
- Chain q
- 25S rRNA (cytosine(2870)-C(5))-methyltransferase
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