IL_7RQ8_229

3D structure

PDB id

7RQ8 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal structure of the wild-type Thermus thermophilus 70S ribosome in complex with iboxamycin, mRNA, deacylated A- and E-site tRNAs, and aminoacylated P-site tRNA at 2.50A resolution

Experimental method

X-RAY DIFFRACTION

Resolution

2.5 Å

Loop

Sequence

UG*CAACAAG

Length

9 nucleotides

Bulged bases

7RQ8|1|2A|C|1509

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_7RQ8_229 not in the Motif Atlas

Homologous match to IL_7RQB_061

Geometric discrepancy: 0.2808

The information below is about IL_7RQB_061

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_52493.1

Basepair signature

cWW-L-cWW-L-L

Number of instances in this motif group

2

Unit IDs

7RQ8|1|2A|U|1481
7RQ8|1|2A|G|1482
*
7RQ8|1|2A|C|1506
7RQ8|1|2A|A|1507
7RQ8|1|2A|A|1508
7RQ8|1|2A|C|1509
7RQ8|1|2A|A|1509|||A
7RQ8|1|2A|A|1509|||B
7RQ8|1|2A|G|1510

Current chains

Chain 2A

23S Ribosomal RNA

Nearby chains