IL_7RQ9_351
3D structure
- PDB id
- 7RQ9 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Crystal structure of the A2058-dimethylated Thermus thermophilus 70S ribosome in complex with iboxamycin, mRNA, deacylated A- and E-site tRNAs, and aminoacylated P-site tRNA at 2.60A resolution
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 2.6 Å
Loop
- Sequence
- GCACUG*CAAAC
- Length
- 11 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_7RQ9_351 not in the Motif Atlas
- Geometric match to IL_4V9F_035
- Geometric discrepancy: 0.2182
- The information below is about IL_4V9F_035
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_38603.1
- Basepair signature
- cWW-cWS-L-R-L-R-R-L-cWW
- Number of instances in this motif group
- 2
Unit IDs
7RQ9|1|2A|G|864
7RQ9|1|2A|C|865
7RQ9|1|2A|A|866
7RQ9|1|2A|C|867
7RQ9|1|2A|U|868
7RQ9|1|2A|G|869
*
7RQ9|1|2A|C|908
7RQ9|1|2A|A|909
7RQ9|1|2A|A|910
7RQ9|1|2A|A|911
7RQ9|1|2A|C|912
Current chains
- Chain 2A
- 23S Ribosomal RNA
Nearby chains
- Chain 20
- 50S ribosomal protein L27
- Chain 2B
- 5S ribosomal RNA; 5S rRNA
- Chain 2Q
- 50S ribosomal protein L16
- Chain 2Z
- 50S ribosomal protein L25
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