IL_7RQA_257

3D structure

PDB id

7RQA (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal structure of the Thermus thermophilus 70S ribosome in complex with protein Y, A-site aminoacyl-tRNA analog ACC-PMN, and P-site MTI-tripeptidyl-tRNA analog ACCA-ITM at 2.40A resolution

Experimental method

X-RAY DIFFRACTION

Resolution

2.4 Å

Loop

Sequence

GGAG*CGCCGGUGAAAUAC

Length

18 nucleotides

Bulged bases

None detected

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_7RQA_257 not in the Motif Atlas

Homologous match to IL_7RQB_086

Geometric discrepancy: 0.2119

The information below is about IL_7RQB_086

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

7RQA|1|2A|G|2124
7RQA|1|2A|G|2125
7RQA|1|2A|A|2126
7RQA|1|2A|G|2127
*
7RQA|1|2A|C|2161
7RQA|1|2A|G|2162
7RQA|1|2A|C|2163
7RQA|1|2A|C|2164
7RQA|1|2A|G|2165
7RQA|1|2A|G|2166
7RQA|1|2A|U|2167
7RQA|1|2A|G|2168
7RQA|1|2A|A|2169
7RQA|1|2A|A|2170
7RQA|1|2A|A|2171
7RQA|1|2A|U|2172
7RQA|1|2A|A|2173
7RQA|1|2A|C|2174

Current chains

Chain 2A

23S Ribosomal RNA

Nearby chains