IL_7RQA_316
3D structure
- PDB id
- 7RQA (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Crystal structure of the Thermus thermophilus 70S ribosome in complex with protein Y, A-site aminoacyl-tRNA analog ACC-PMN, and P-site MTI-tripeptidyl-tRNA analog ACCA-ITM at 2.40A resolution
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 2.4 Å
Loop
- Sequence
- GGAAUU*AGGAAC
- Length
- 12 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_7RQA_316 not in the Motif Atlas
- Geometric match to IL_4LFB_030
- Geometric discrepancy: 0.062
- The information below is about IL_4LFB_030
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_04668.2
- Basepair signature
- cWW-cWW-cWW-L-R-L-R-cWW
- Number of instances in this motif group
- 8
Unit IDs
7RQA|1|2a|G|673
7RQA|1|2a|G|674
7RQA|1|2a|A|675
7RQA|1|2a|A|676
7RQA|1|2a|U|677
7RQA|1|2a|U|678
*
7RQA|1|2a|A|712
7RQA|1|2a|G|713
7RQA|1|2a|G|714
7RQA|1|2a|A|715
7RQA|1|2a|A|716
7RQA|1|2a|C|717
Current chains
- Chain 2a
- 16S Ribosomal RNA
Nearby chains
- Chain 2D
- 50S ribosomal protein L2
- Chain 2f
- 30S ribosomal protein S6
- Chain 2k
- 30S ribosomal protein S11
- Chain 2r
- 30S ribosomal protein S18
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