IL_7RQC_057

3D structure

PDB id

7RQC (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal structure of the Thermus thermophilus 70S ribosome in complex with protein Y, A-site aminoacyl-tRNA analog ACC-PMN, and P-site MFI-tripeptidyl-tRNA analog ACCA-IFM at 2.50A resolution

Experimental method

X-RAY DIFFRACTION

Resolution

2.5 Å

Loop

Sequence

CUAG*CGAAG

Length

9 nucleotides

Bulged bases

7RQC|1|1A|A|1554

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_7RQC_057 not in the Motif Atlas

Homologous match to IL_7RQB_057

Geometric discrepancy: 0.0535

The information below is about IL_7RQB_057

Detailed Annotation

tSH-tHW

Broad Annotation

No text annotation

Motif group

IL_04059.1

Basepair signature

cWW-tWH-tHS-cWW

Number of instances in this motif group

13

Unit IDs

7RQC|1|1A|C|1437
7RQC|1|1A|U|1438
7RQC|1|1A|A|1439
7RQC|1|1A|G|1440
*
7RQC|1|1A|C|1551
7RQC|1|1A|G|1552
7RQC|1|1A|A|1553
7RQC|1|1A|A|1554
7RQC|1|1A|G|1555

Current chains

Chain 1A

23S Ribosomal RNA

Nearby chains