3D structure

PDB id
7RR5 (explore in PDB, NAKB, or RNA 3D Hub)
Description
Structure of ribosomal complex bound with Rbg1/Tma46
Experimental method
ELECTRON MICROSCOPY
Resolution
3.23 Å

Loop

Sequence
CC*GCG
Length
5 nucleotides
Bulged bases
7RR5|1|C1|C|1779
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
IL_7RR5_069 not in the Motif Atlas
Geometric match to IL_5TBW_069
Geometric discrepancy: 0.1022
The information below is about IL_5TBW_069
Detailed Annotation
Single bulged C
Broad Annotation
No text annotation
Motif group
IL_61258.13
Basepair signature
cWW-L-cWW
Number of instances in this motif group
40

Unit IDs

7RR5|1|C1|C|1669
7RR5|1|C1|C|1670
*
7RR5|1|C1|G|1778
7RR5|1|C1|C|1779
7RR5|1|C1|G|1780

Current chains

Chain C1
25S rRNA

Nearby chains

Chain LR
60S ribosomal protein L19-A
Chain Lg
60S ribosomal protein L34-A

Coloring options:


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