IL_7RR5_137

3D structure

PDB id

7RR5 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of ribosomal complex bound with Rbg1/Tma46

Experimental method

ELECTRON MICROSCOPY

Resolution

3.23 Å

Loop

Sequence

CC*GUUG

Length

6 nucleotides

Bulged bases

7RR5|1|C1|U|3354, 7RR5|1|C1|U|3355

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_7RR5_137 not in the Motif Atlas

Geometric match to IL_5TBW_136

Geometric discrepancy: 0.2452

The information below is about IL_5TBW_136

Detailed Annotation

Multiple bulged bases

Broad Annotation

No text annotation

Motif group

IL_82107.1

Basepair signature

cWW-cWW

Number of instances in this motif group

34

Unit IDs

7RR5|1|C1|C|3349
7RR5|1|C1|C|3350
*
7RR5|1|C1|G|3353
7RR5|1|C1|U|3354
7RR5|1|C1|U|3355
7RR5|1|C1|G|3356

Current chains

Chain C1

25S rRNA

Nearby chains

Chain LU

60S ribosomal protein L22-A

Chain SI

RPS8A isoform 1