IL_7RR5_187
3D structure
- PDB id
- 7RR5 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of ribosomal complex bound with Rbg1/Tma46
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.23 Å
Loop
- Sequence
- CGA*UCUUUGG
- Length
- 10 nucleotides
- Bulged bases
- 7RR5|1|C2|C|1096, 7RR5|1|C2|U|1098, 7RR5|1|C2|G|1100
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_7RR5_187 not in the Motif Atlas
- Homologous match to IL_4V88_437
- Geometric discrepancy: 0.1453
- The information below is about IL_4V88_437
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_62898.1
- Basepair signature
- cWW-L-R-L-cWW
- Number of instances in this motif group
- 2
Unit IDs
7RR5|1|C2|C|1034
7RR5|1|C2|G|1035
7RR5|1|C2|A|1036
*
7RR5|1|C2|U|1095
7RR5|1|C2|C|1096
7RR5|1|C2|U|1097
7RR5|1|C2|U|1098
7RR5|1|C2|U|1099
7RR5|1|C2|G|1100
7RR5|1|C2|G|1101
Current chains
- Chain C2
- 18S rRNA
Nearby chains
- Chain SC
- RPS2 isoform 1
- Chain SL
- 40S ribosomal protein S11-B
- Chain SN
- 40S ribosomal protein S13
- Chain SW
- RPS22A isoform 1
- Chain SX
- 40S ribosomal protein S23
- Chain Sb
- 40S ribosomal protein S27-A
Coloring options: