IL_7RR5_188
3D structure
- PDB id
- 7RR5 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of ribosomal complex bound with Rbg1/Tma46
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.23 Å
Loop
- Sequence
- GGAU*GCAC
- Length
- 8 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_7RR5_188 not in the Motif Atlas
- Homologous match to IL_4V88_438
- Geometric discrepancy: 0.1426
- The information below is about IL_4V88_438
- Detailed Annotation
- Tandem non-canonical cWW pairs
- Broad Annotation
- No text annotation
- Motif group
- IL_67085.2
- Basepair signature
- cWW-cWW-cWW-cWW
- Number of instances in this motif group
- 55
Unit IDs
7RR5|1|C2|G|1041
7RR5|1|C2|G|1042
7RR5|1|C2|A|1043
7RR5|1|C2|U|1044
*
7RR5|1|C2|G|1074
7RR5|1|C2|C|1075
7RR5|1|C2|A|1076
7RR5|1|C2|C|1077
Current chains
- Chain C2
- 18S rRNA
Nearby chains
- Chain SA
- 40S ribosomal protein S0
- Chain SB
- RPS1A isoform 1
- Chain SN
- 40S ribosomal protein S13
- Chain Sa
- RPS26B isoform 1
Coloring options: