IL_7RR5_209
3D structure
- PDB id
- 7RR5 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of ribosomal complex bound with Rbg1/Tma46
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.23 Å
Loop
- Sequence
- GCCAGCGA*UUGUGAAAC
- Length
- 17 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_7RR5_209 not in the Motif Atlas
- Homologous match to IL_4V88_459
- Geometric discrepancy: 0.0969
- The information below is about IL_4V88_459
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_10447.1
- Basepair signature
- cWW-tWW-L-R-L-R-L-R-L-tHW-R-L-cWW
- Number of instances in this motif group
- 2
Unit IDs
7RR5|1|C2|G|1480
7RR5|1|C2|C|1481
7RR5|1|C2|C|1482
7RR5|1|C2|A|1483
7RR5|1|C2|G|1484
7RR5|1|C2|C|1485
7RR5|1|C2|G|1486
7RR5|1|C2|A|1487
*
7RR5|1|C2|U|1519
7RR5|1|C2|U|1520
7RR5|1|C2|G|1521
7RR5|1|C2|U|1522
7RR5|1|C2|G|1523
7RR5|1|C2|A|1524
7RR5|1|C2|A|1525
7RR5|1|C2|A|1526
7RR5|1|C2|C|1527
Current chains
- Chain C2
- 18S rRNA
Nearby chains
- Chain SD
- RPS3 isoform 1
- Chain SF
- Rps5p
- Chain SQ
- 40S ribosomal protein S16-A
- Chain ST
- 40S ribosomal protein S19-A
- Chain SU
- RPS20 isoform 1
- Chain Sd
- RPS29A isoform 1
Coloring options: