IL_7RR5_223
3D structure
- PDB id
- 7RR5 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of ribosomal complex bound with Rbg1/Tma46
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.23 Å
Loop
- Sequence
- CUCA*UUUG
- Length
- 8 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_7RR5_223 not in the Motif Atlas
- Homologous match to IL_4V88_473
- Geometric discrepancy: 0.134
- The information below is about IL_4V88_473
- Detailed Annotation
- Tandem non-canonical cWW pairs
- Broad Annotation
- No text annotation
- Motif group
- IL_36174.1
- Basepair signature
- cWW-cWW-cWW-cWW
- Number of instances in this motif group
- 15
Unit IDs
7RR5|1|C2|C|1675
7RR5|1|C2|U|1676
7RR5|1|C2|C|1677
7RR5|1|C2|A|1678
*
7RR5|1|C2|U|1723
7RR5|1|C2|U|1724
7RR5|1|C2|U|1725
7RR5|1|C2|G|1726
Current chains
- Chain C2
- 18S rRNA
Nearby chains
- Chain C1
- Large subunit ribosomal RNA; LSU rRNA
- Chain LW
- RPL24A isoform 1
- Chain SG
- 40S ribosomal protein S6
- Chain SI
- RPS8A isoform 1
Coloring options: