IL_7RR5_245
3D structure
- PDB id
- 7RR5 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of ribosomal complex bound with Rbg1/Tma46
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.23 Å
Loop
- Sequence
- UUUG*CAUG
- Length
- 8 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_7RR5_245 not in the Motif Atlas
- Geometric match to IL_1D4R_001
- Geometric discrepancy: 0.2254
- The information below is about IL_1D4R_001
- Detailed Annotation
- Tandem non-canonical cWW pairs
- Broad Annotation
- No text annotation
- Motif group
- IL_85033.2
- Basepair signature
- cWW-cWW-cWW-cWW
- Number of instances in this motif group
- 35
Unit IDs
7RR5|1|C2|U|748
7RR5|1|C2|U|749
7RR5|1|C2|U|750
7RR5|1|C2|G|751
*
7RR5|1|C2|C|798
7RR5|1|C2|A|799
7RR5|1|C2|U|800
7RR5|1|C2|G|801
Current chains
- Chain C2
- 18S rRNA
Nearby chains
- Chain SE
- 40S ribosomal protein S4
- Chain SH
- 40S ribosomal protein S7
- Chain SL
- 40S ribosomal protein S11-B
- Chain SW
- RPS22A isoform 1
Coloring options: