IL_7RYF_011
3D structure
- PDB id
- 7RYF (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- A. baumannii Ribosome-TP-6076 complex: P-site tRNA 70S
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.65 Å
Loop
- Sequence
- GAAC*GAGUGAAAUAGAUC
- Length
- 18 nucleotides
- Bulged bases
- 7RYF|1|A|U|503, 7RYF|1|A|U|507
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_7RYF_011 not in the Motif Atlas
- Homologous match to IL_7RQB_014
- Geometric discrepancy: 0.0848
- The information below is about IL_7RQB_014
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_60992.6
- Basepair signature
- cWW-cWS-tSH-L-tHH-tWH-cWW-tSS-tSH-L-L
- Number of instances in this motif group
- 6
Unit IDs
7RYF|1|A|G|480
7RYF|1|A|A|481
7RYF|1|A|A|482
7RYF|1|A|C|483
*
7RYF|1|A|G|495
7RYF|1|A|A|496
7RYF|1|A|G|497
7RYF|1|A|U|498
7RYF|1|A|G|499
7RYF|1|A|A|500
7RYF|1|A|A|501
7RYF|1|A|A|502
7RYF|1|A|U|503
7RYF|1|A|A|504
7RYF|1|A|G|505
7RYF|1|A|A|506
7RYF|1|A|U|507
7RYF|1|A|C|508
Current chains
- Chain A
- 23S ribosomal RNA
Nearby chains
- Chain R
- 50S ribosomal protein L22
- Chain S
- 50S ribosomal protein L23
- Chain T
- 50S ribosomal protein L24
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