IL_7RYF_095

3D structure

PDB id

7RYF (explore in PDB, NAKB, or RNA 3D Hub)

Description

A. baumannii Ribosome-TP-6076 complex: P-site tRNA 70S

Experimental method

ELECTRON MICROSCOPY

Resolution

2.65 Å

Loop

Sequence

GAUAAC*GGAAGC

Length

12 nucleotides

Bulged bases

7RYF|1|A|A|2761

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_7RYF_095 not in the Motif Atlas

Homologous match to IL_7A0S_098

Geometric discrepancy: 0.1163

The information below is about IL_7A0S_098

Detailed Annotation

UAA/GAN with extra cWW

Broad Annotation

No text annotation

Motif group

IL_91079.1

Basepair signature

cWW-cWW-tWH-L-tHS-cWW

Number of instances in this motif group

8

Unit IDs

7RYF|1|A|G|2733
7RYF|1|A|A|2734
7RYF|1|A|U|2735
7RYF|1|A|A|2736
7RYF|1|A|A|2737
7RYF|1|A|C|2738
*
7RYF|1|A|G|2758
7RYF|1|A|G|2759
7RYF|1|A|A|2760
7RYF|1|A|A|2761
7RYF|1|A|G|2762
7RYF|1|A|C|2763

Current chains

Chain A

23S ribosomal RNA

Nearby chains

Chain 3

50S ribosomal protein L36

Chain G

50S ribosomal protein L6

Chain I

50S ribosomal protein L13