IL_7RYF_140

3D structure

PDB id

7RYF (explore in PDB, NAKB, or RNA 3D Hub)

Description

A. baumannii Ribosome-TP-6076 complex: P-site tRNA 70S

Experimental method

ELECTRON MICROSCOPY

Resolution

2.65 Å

Loop

Sequence

GGGAG*UC

Length

7 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_7RYF_140 not in the Motif Atlas

Homologous match to IL_5J7L_036

Geometric discrepancy: 0.1155

The information below is about IL_5J7L_036

Detailed Annotation

Left turn

Broad Annotation

Left turn

Motif group

IL_29346.2

Basepair signature

cWW-L-cWW-L-L

Number of instances in this motif group

3

Unit IDs

7RYF|1|a|G|771
7RYF|1|a|G|772
7RYF|1|a|G|773
7RYF|1|a|A|774
7RYF|1|a|G|775
*
7RYF|1|a|U|801
7RYF|1|a|C|802

Current chains

Chain a

16S Ribosomal RNA

Nearby chains

Chain C

50S ribosomal protein L2

Chain k

30S ribosomal protein S11