IL_7RYF_173

3D structure

PDB id

7RYF (explore in PDB, NAKB, or RNA 3D Hub)

Description

A. baumannii Ribosome-TP-6076 complex: P-site tRNA 70S

Experimental method

ELECTRON MICROSCOPY

Resolution

2.65 Å

Loop

Sequence

CAA*UCG

Length

6 nucleotides

Bulged bases

None detected

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_7RYF_173 not in the Motif Atlas

Homologous match to IL_4V9K_064

Geometric discrepancy: 0.467

The information below is about IL_4V9K_064

Detailed Annotation

Isolated non-canonical cWW pair

Broad Annotation

No text annotation

Motif group

IL_01003.5

Basepair signature

cWW-cWW-cWW

Number of instances in this motif group

238

Unit IDs

7RYF|1|v|C|51
7RYF|1|v|A|52
7RYF|1|v|A|53
*
7RYF|1|v|U|63
7RYF|1|v|C|64
7RYF|1|v|G|65

Current chains

Chain v

tRNA-met

Nearby chains

Chain A

Large subunit ribosomal RNA; LSU rRNA

Chain L

50S ribosomal protein L16

Chain V

50S ribosomal protein L27