IL_7RYG_009

3D structure

PDB id

7RYG (explore in PDB, NAKB, or RNA 3D Hub)

Description

A. baumannii Ribosome-TP-6076 complex: E-site tRNA 70S

Experimental method

ELECTRON MICROSCOPY

Resolution

2.38 Å

Loop

Sequence

UAAG*UGAUG

Length

9 nucleotides

Bulged bases

7RYG|1|A|U|365

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_7RYG_009 not in the Motif Atlas

Geometric match to IL_5J7L_299

Geometric discrepancy: 0.2305

The information below is about IL_5J7L_299

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_68574.4

Basepair signature

cWW-tHH-tHS-cWW

Number of instances in this motif group

3

Unit IDs

7RYG|1|A|U|279
7RYG|1|A|A|280
7RYG|1|A|A|281
7RYG|1|A|G|282
*
7RYG|1|A|U|362
7RYG|1|A|G|363
7RYG|1|A|A|364
7RYG|1|A|U|365
7RYG|1|A|G|366

Current chains

Chain A

23S ribosomal RNA

Nearby chains

Chain W

50S ribosomal protein L28