IL_7RYG_045

3D structure

PDB id

7RYG (explore in PDB, NAKB, or RNA 3D Hub)

Description

A. baumannii Ribosome-TP-6076 complex: E-site tRNA 70S

Experimental method

ELECTRON MICROSCOPY

Resolution

2.38 Å

Loop

Sequence

CCAAC*GGG

Length

8 nucleotides

Bulged bases

7RYG|1|A|G|1327

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_7RYG_045 not in the Motif Atlas

Homologous match to IL_5J7L_291

Geometric discrepancy: 0.1759

The information below is about IL_5J7L_291

Detailed Annotation

C-loop

Broad Annotation

No text annotation

Motif group

IL_63596.11

Basepair signature

cWW-cWS-cSH-tWH-cWW-L

Number of instances in this motif group

19

Unit IDs

7RYG|1|A|C|1314
7RYG|1|A|C|1315
7RYG|1|A|A|1316
7RYG|1|A|A|1317
7RYG|1|A|C|1318
*
7RYG|1|A|G|1326
7RYG|1|A|G|1327
7RYG|1|A|G|1328

Current chains

Chain A

23S ribosomal RNA

Nearby chains

Chain R

50S ribosomal protein L22