IL_7RYG_051

3D structure

PDB id

7RYG (explore in PDB, NAKB, or RNA 3D Hub)

Description

A. baumannii Ribosome-TP-6076 complex: E-site tRNA 70S

Experimental method

ELECTRON MICROSCOPY

Resolution

2.38 Å

Loop

Sequence

CUAA*UGAUG

Length

9 nucleotides

Bulged bases

7RYG|1|A|U|1552

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_7RYG_051 not in the Motif Atlas

Homologous match to IL_7RQB_057

Geometric discrepancy: 0.0918

The information below is about IL_7RQB_057

Detailed Annotation

tSH-tHW

Broad Annotation

No text annotation

Motif group

IL_04059.1

Basepair signature

cWW-tWH-tHS-cWW

Number of instances in this motif group

13

Unit IDs

7RYG|1|A|C|1432
7RYG|1|A|U|1433
7RYG|1|A|A|1434
7RYG|1|A|A|1435
*
7RYG|1|A|U|1549
7RYG|1|A|G|1550
7RYG|1|A|A|1551
7RYG|1|A|U|1552
7RYG|1|A|G|1553

Current chains

Chain A

23S ribosomal RNA

Nearby chains