IL_7RYG_061

3D structure

PDB id

7RYG (explore in PDB, NAKB, or RNA 3D Hub)

Description

A. baumannii Ribosome-TP-6076 complex: E-site tRNA 70S

Experimental method

ELECTRON MICROSCOPY

Resolution

2.38 Å

Loop

Sequence

UGAUG*CUGAG

Length

10 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_7RYG_061 not in the Motif Atlas

Homologous match to IL_5J7L_310

Geometric discrepancy: 0.4597

The information below is about IL_5J7L_310

Detailed Annotation

Triple sheared

Broad Annotation

No text annotation

Motif group

IL_50730.2

Basepair signature

cWW-tSH-tHS-tHS-cWW

Number of instances in this motif group

19

Unit IDs

7RYG|1|A|U|1716
7RYG|1|A|G|1717
7RYG|1|A|A|1718
7RYG|1|A|U|1719
7RYG|1|A|G|1720
*
7RYG|1|A|C|1732
7RYG|1|A|U|1733
7RYG|1|A|G|1734
7RYG|1|A|A|1735
7RYG|1|A|G|1736

Current chains

Chain A

23S ribosomal RNA

Nearby chains