IL_7RYG_164

3D structure

PDB id

7RYG (explore in PDB, NAKB, or RNA 3D Hub)

Description

A. baumannii Ribosome-TP-6076 complex: E-site tRNA 70S

Experimental method

ELECTRON MICROSCOPY

Resolution

2.38 Å

Loop

Sequence

CGGAUU*AUGAAG

Length

12 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_7RYG_164 not in the Motif Atlas

Geometric match to IL_4LFB_055

Geometric discrepancy: 0.0826

The information below is about IL_4LFB_055

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_57885.2

Basepair signature

cWW-tSH-tSH-tHS-cWW-cWW

Number of instances in this motif group

7

Unit IDs

7RYG|1|a|C|1300
7RYG|1|a|G|1301
7RYG|1|a|G|1302
7RYG|1|a|A|1303
7RYG|1|a|U|1304
7RYG|1|a|U|1305
*
7RYG|1|a|A|1326
7RYG|1|a|U|1327
7RYG|1|a|G|1328
7RYG|1|a|A|1329
7RYG|1|a|A|1330
7RYG|1|a|G|1331

Current chains

Chain a

16S Ribosomal RNA

Nearby chains

Chain m

30S ribosomal protein S13