IL_7RYH_009

3D structure

PDB id

7RYH (explore in PDB, NAKB, or RNA 3D Hub)

Description

A. baumannii Ribosome-TP-6076 complex: Empty 70S

Experimental method

ELECTRON MICROSCOPY

Resolution

2.43 Å

Loop

Sequence

UAAG*UGAUG

Length

9 nucleotides

Bulged bases

7RYH|1|A|U|365

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_7RYH_009 not in the Motif Atlas

Geometric match to IL_5J7L_299

Geometric discrepancy: 0.2608

The information below is about IL_5J7L_299

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_68574.4

Basepair signature

cWW-tHH-tHS-cWW

Number of instances in this motif group

3

Unit IDs

7RYH|1|A|U|279
7RYH|1|A|A|280
7RYH|1|A|A|281
7RYH|1|A|G|282
*
7RYH|1|A|U|362
7RYH|1|A|G|363
7RYH|1|A|A|364
7RYH|1|A|U|365
7RYH|1|A|G|366

Current chains

Chain A

23S ribosomal RNA

Nearby chains

Chain W

50S ribosomal protein L28